STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ77789.1COG2940 Proteins containing SET domain. (173 aa)    
Predicted Functional Partners:
EAQ78444.1
Acetoin utilization protein; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
  
 0.929
atpD
H+-transporting ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.928
EAQ81252.1
Probable DNA-directed RNA polymerase alpha chain; COG0457 FOG: TPR repeat.
   
 0.908
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
    
 0.894
EAQ78829.1
curved-DNA-binding protein, DnaJ family protein; COG2214 DnaJ-class molecular chaperone.
    
 0.894
EAQ78781.1
COG0666 FOG: Ankyrin repeat.
  
 
 0.815
EAQ82233.1
Sir2 family, possible ADP ribosyltransferase; COG0846 NAD-dependent protein deacetylases, SIR2 family.
  
 
 0.812
EAQ82061.1
N,N-dimethyltransferase-like protein; COG0500 SAM-dependent methyltransferases.
   
 0.706
EAQ80946.1
COG0666 FOG: Ankyrin repeat.
  
 
 0.679
EAQ80585.1
Type III restriction enzyme, res subunit; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
   
 0.676
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.