STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ77790.1Pyrolysin; COG1404 Subtilisin-like serine proteases. (1267 aa)    
Predicted Functional Partners:
EAQ77747.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
  0.803
EAQ81202.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
 
  0.795
EAQ81854.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
  0.769
EAQ79896.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
 
  0.734
EAQ81858.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
  0.721
EAQ77376.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
 
     0.712
EAQ79255.1
Probable G protein-coupled receptor; COG4886 Leucine-rich repeat (LRR) protein.
  
 
  0.694
EAQ79173.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
  
   0.654
EAQ79101.1
COG2453 Predicted protein-tyrosine phosphatase.
  
    0.633
EAQ77475.1
Peroxidase.
  
 
  0.618
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.