Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ77799.1 | EAQ77800.1 | DSM3645_25557 | DSM3645_25562 | Hypothetical protein. | COG0248 Exopolyphosphatase. | 0.773 |
EAQ77799.1 | EAQ77801.1 | DSM3645_25557 | DSM3645_25567 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EAQ77799.1 | EAQ77803.1 | DSM3645_25557 | DSM3645_25577 | Hypothetical protein. | Hypothetical protein; COG0802 Predicted ATPase or kinase. | 0.618 |
EAQ77799.1 | thiL | DSM3645_25557 | DSM3645_25572 | Hypothetical protein. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.618 |
EAQ77800.1 | EAQ77799.1 | DSM3645_25562 | DSM3645_25557 | COG0248 Exopolyphosphatase. | Hypothetical protein. | 0.773 |
EAQ77800.1 | EAQ77801.1 | DSM3645_25562 | DSM3645_25567 | COG0248 Exopolyphosphatase. | Hypothetical protein. | 0.837 |
EAQ77800.1 | EAQ77803.1 | DSM3645_25562 | DSM3645_25577 | COG0248 Exopolyphosphatase. | Hypothetical protein; COG0802 Predicted ATPase or kinase. | 0.618 |
EAQ77800.1 | ribBA | DSM3645_25562 | DSM3645_04380 | COG0248 Exopolyphosphatase. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.402 |
EAQ77800.1 | thiL | DSM3645_25562 | DSM3645_25572 | COG0248 Exopolyphosphatase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.618 |
EAQ77801.1 | EAQ77799.1 | DSM3645_25567 | DSM3645_25557 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EAQ77801.1 | EAQ77800.1 | DSM3645_25567 | DSM3645_25562 | Hypothetical protein. | COG0248 Exopolyphosphatase. | 0.837 |
EAQ77801.1 | EAQ77803.1 | DSM3645_25567 | DSM3645_25577 | Hypothetical protein. | Hypothetical protein; COG0802 Predicted ATPase or kinase. | 0.618 |
EAQ77801.1 | ribBA | DSM3645_25567 | DSM3645_04380 | Hypothetical protein. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.721 |
EAQ77801.1 | thiL | DSM3645_25567 | DSM3645_25572 | Hypothetical protein. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.678 |
EAQ77803.1 | EAQ77799.1 | DSM3645_25577 | DSM3645_25557 | Hypothetical protein; COG0802 Predicted ATPase or kinase. | Hypothetical protein. | 0.618 |
EAQ77803.1 | EAQ77800.1 | DSM3645_25577 | DSM3645_25562 | Hypothetical protein; COG0802 Predicted ATPase or kinase. | COG0248 Exopolyphosphatase. | 0.618 |
EAQ77803.1 | EAQ77801.1 | DSM3645_25577 | DSM3645_25567 | Hypothetical protein; COG0802 Predicted ATPase or kinase. | Hypothetical protein. | 0.618 |
EAQ77803.1 | thiL | DSM3645_25577 | DSM3645_25572 | Hypothetical protein; COG0802 Predicted ATPase or kinase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.861 |
EAQ80462.1 | ribBA | DSM3645_11472 | DSM3645_04380 | Riboflavin bifunctional biosynthesis protein RibG; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
EAQ80462.1 | ribH | DSM3645_11472 | DSM3645_20512 | Riboflavin bifunctional biosynthesis protein RibG; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Riboflavin synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.996 |
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