STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ79119.1S-layer related protein-like; COG5492 Bacterial surface proteins containing Ig-like domains. (817 aa)    
Predicted Functional Partners:
EAQ77023.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.967
EAQ79118.1
Putative WD-repeat containing protein; COG2319 FOG: WD40 repeat.
 
     0.935
EAQ79120.1
COG4102 Uncharacterized protein conserved in bacteria.
 
     0.928
EAQ77700.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 0.912
EAQ78309.1
Probable vegetatible incompatibility protein; COG2319 FOG: WD40 repeat.
 
     0.791
EAQ81148.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.773
EAQ79669.1
Hypothetical protein.
  
     0.771
EAQ80739.1
Hypothetical protein; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32).
  
     0.770
EAQ81146.1
Probable serine proteinase, subtilase family protein.
  
     0.768
EAQ81000.1
Hypothetical protein; COG4099 Predicted peptidase.
  
     0.756
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.