STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78509.1COG3734 2-keto-3-deoxy-galactonokinase. (335 aa)    
Predicted Functional Partners:
EAQ78510.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
  
 0.871
EAQ80651.1
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.748
EAQ78497.1
Mandelate racemase / muconate lactonizing enzyme; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
 
 
 0.619
EAQ77717.1
Hypothetical protein; COG3386 Gluconolactonase.
 
     0.571
EAQ80011.1
D-mannonate oxidoreductase; COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
  
     0.546
EAQ81792.1
Hydrolase, UxaA family protien; COG2721 Altronate dehydratase.
  
     0.541
EAQ82234.1
Muconate lactonizing enzyme; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.461
EAQ79809.1
Hypothetical protein; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
    
 0.460
EAQ77175.1
COG3386 Gluconolactonase.
 
     0.420
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.