STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78539.1Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family). (327 aa)    
Predicted Functional Partners:
EAQ78540.1
COG5426 Uncharacterized membrane protein.
       0.808
EAQ78543.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
       0.808
EAQ78541.1
Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase).
       0.807
EAQ78542.1
Inter-alpha-trypsin inhibitor heavy chain H2 precursor-like protein.
       0.789
EAQ78544.1
Probable MoxR-related protein; COG0714 MoxR-like ATPases.
       0.761
EAQ78545.1
Hypothetical protein.
       0.615
EAQ78546.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.480
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.