STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78886.1COG0288 Carbonic anhydrase. (314 aa)    
Predicted Functional Partners:
EAQ81459.1
Ferripyochelin-binding protein; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.
    
 0.865
EAQ77304.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
  0.813
EAQ81636.1
COG2116 Formate/nitrite family of transporters.
  
    0.726
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.641
EAQ78885.1
COG0347 Nitrogen regulatory protein PII.
       0.620
EAQ78884.1
Hypothetical protein; COG3329 Predicted permease.
     
 0.466
EAQ77303.1
Sulphate transporter; COG0659 Sulfate permease and related transporters (MFS superfamily).
 
 
 0.416
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.