STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78955.1Probable transcription regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (249 aa)    
Predicted Functional Partners:
EAQ80383.1
Xylose operon regulatory protein; COG1609 Transcriptional regulators.
  
     0.746
EAQ78956.1
Hypothetical protein.
       0.512
EAQ78954.1
Hypothetical protein.
       0.511
EAQ78553.1
Probable transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.491
EAQ78953.1
Hypothetical protein.
       0.459
EAQ78957.1
COG0640 Predicted transcriptional regulators.
  
    0.442
EAQ81607.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.439
EAQ79152.1
DNA methylation and regulatory protein; COG2169 Adenosine deaminase.
  
 
  0.420
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.