STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81622.1Polysialic acid transport ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (416 aa)    
Predicted Functional Partners:
EAQ81623.1
ABC transporter permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.999
EAQ79980.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.778
EAQ81573.1
Wza; COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.778
EAQ81614.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
 
 0.712
EAQ82405.1
Hypothetical protein; COG1040 Predicted amidophosphoribosyltransferases.
   
    0.707
EAQ81624.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
   
 0.602
EAQ77491.1
COG0438 Glycosyltransferase.
 
 0.569
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.533
EAQ81568.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.524
EAQ77500.1
COG0438 Glycosyltransferase.
 
 
 0.520
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.