STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ81697.1COG1843 Flagellar hook capping protein. (1756 aa)    
Predicted Functional Partners:
EAQ78184.1
Two-component sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
 
   
 0.793
EAQ80665.1
Site-specific recombinase and resolvase superfamily protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
    0.778
EAQ81865.1
COG3385 FOG: Transposase and inactivated derivatives.
  
     0.767
EAQ77448.1
COG3385 FOG: Transposase and inactivated derivatives.
  
     0.767
EAQ77904.1
Polyketide synthase, putative; COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
     0.764
EAQ80620.1
Hypothetical protein.
  
     0.743
EAQ81711.1
Hypothetical protein.
  
     0.742
EAQ80636.1
Hypothetical protein.
  
  
  0.725
EAQ80750.1
Hypothetical protein.
  
     0.705
EAQ81712.1
Hypothetical protein.
  
     0.696
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.