Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ77784.1 | EAQ81746.1 | DSM3645_25482 | DSM3645_29232 | DNA-binding protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | Hypothetical protein; COG5659 FOG: Transposase. | 0.486 |
EAQ77904.1 | EAQ81746.1 | DSM3645_27036 | DSM3645_29232 | Polyketide synthase, putative; COG0331 (acyl-carrier-protein) S-malonyltransferase. | Hypothetical protein; COG5659 FOG: Transposase. | 0.410 |
EAQ80603.1 | EAQ81746.1 | DSM3645_14695 | DSM3645_29232 | Hypothetical protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | Hypothetical protein; COG5659 FOG: Transposase. | 0.486 |
EAQ81745.1 | EAQ81746.1 | DSM3645_29227 | DSM3645_29232 | Putative resolvase; COG1961 Site-specific recombinases, DNA invertase Pin homologs. | Hypothetical protein; COG5659 FOG: Transposase. | 0.402 |
EAQ81746.1 | EAQ77784.1 | DSM3645_29232 | DSM3645_25482 | Hypothetical protein; COG5659 FOG: Transposase. | DNA-binding protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | 0.486 |
EAQ81746.1 | EAQ77904.1 | DSM3645_29232 | DSM3645_27036 | Hypothetical protein; COG5659 FOG: Transposase. | Polyketide synthase, putative; COG0331 (acyl-carrier-protein) S-malonyltransferase. | 0.410 |
EAQ81746.1 | EAQ80603.1 | DSM3645_29232 | DSM3645_14695 | Hypothetical protein; COG5659 FOG: Transposase. | Hypothetical protein; COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | 0.486 |
EAQ81746.1 | EAQ81745.1 | DSM3645_29232 | DSM3645_29227 | Hypothetical protein; COG5659 FOG: Transposase. | Putative resolvase; COG1961 Site-specific recombinases, DNA invertase Pin homologs. | 0.402 |