STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ78799.1hsdM; COG0286 Type I restriction-modification system methyltransferase subunit. (104 aa)    
Predicted Functional Partners:
EAQ78798.1
Putative specificity protein s; COG0732 Restriction endonuclease S subunits.
 
 
 0.986
EAQ80078.1
Probable type I restriction modification system methylase; COG0732 Restriction endonuclease S subunits.
 
 
 0.975
EAQ78794.1
Type I restriction-modification system endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.961
EAQ80079.1
Putative type I site specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.947
EAQ78800.1
Hypothetical protein.
       0.773
EAQ78801.1
COG0286 Type I restriction-modification system methyltransferase subunit.
 
    
0.701
EAQ78797.1
Hypothetical protein.
       0.483
EAQ78796.1
Hypothetical protein; COG0117 Pyrimidine deaminase.
  
    0.447
EAQ78802.1
Hypothetical protein.
       0.434
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.