Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05317.1Hypothetical protein; COG0251 putative translation initiation inhibitor, yjgF family. (154 aa)    
Predicted Functional Partners:
EAQ05318.1
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family.
       0.777
EAQ05319.1
COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
    0.773
EAQ05320.1
ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.773
EAQ05321.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.773
EAQ05322.1
ABC transporter permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.773
EAQ05323.1
ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
    0.764
EAQ05315.1
COG3971 2-keto-4-pentenoate hydratase.
 
     0.722
EAQ05316.1
Hypothetical protein.
 
     0.718
EAQ05324.1
N-carbamyl-D-amino acid amidohydrolase; COG0388 Predicted amidohydrolase.
  
   0.541
EAQ06744.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
   
  0.508
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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