Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05345.1COG1538 Outer membrane protein. (456 aa)    
Predicted Functional Partners:
EAQ05346.1
ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
 0.965
EAQ06728.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein.
  
 0.964
EAQ05347.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
 
 0.960
EAQ07219.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.900
EAQ05292.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.900
EAQ07701.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.900
EAQ06756.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.900
EAQ06918.1
COG1538 Outer membrane protein.
  
  
 0.838
EAQ06720.1
Hypothetical protein.
  
 0.779
EAQ06651.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
  
 0.752
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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