Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05346.1ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (734 aa)    
Predicted Functional Partners:
EAQ05347.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
 0.994
EAQ05345.1
COG1538 Outer membrane protein.
 
 
 0.965
EAQ06651.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 
 0.945
EAQ06918.1
COG1538 Outer membrane protein.
 
 
 0.900
pstB
ABC phosphate transporter, ATPase subunit PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.801
EAQ06258.1
VCBS; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  
 0.794
EAQ05971.1
COG0845 Membrane-fusion protein.
  
 0.765
EAQ06720.1
Hypothetical protein.
  
 0.765
EAQ06728.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein.
  
 0.765
EAQ07904.1
ABC transporter, ATP binding/permease protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
  0.756
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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