Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ05348.1Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins. (832 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
  0.702
EAQ05346.1
ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  
 0.698
EAQ05385.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
  0.633
EAQ05347.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
 
    0.521
EAQ05349.1
SAPC family protein.
       0.475
EAQ05345.1
COG1538 Outer membrane protein.
 
    0.468
EAQ05237.1
Hypothetical protein.
   
   0.447
EAQ05238.1
Hypothetical protein.
   
   0.447
EAQ07719.1
Hypothetical protein.
 
 
   0.407
EAQ05362.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.400
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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