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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05354.1RecA-family ATPase; COG1066 Predicted ATP-dependent serine protease. (371 aa)    
Predicted Functional Partners:
EAQ05355.1
Hypothetical protein.
 
    0.921
EAQ05356.1
Hypothetical protein.
       0.773
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
    
 0.768
EAQ05497.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
    
 0.768
EAQ07249.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
    
 0.682
EAQ07181.1
Hypothetical protein; COG3311 Predicted transcriptional regulator.
 
   
 0.598
EAQ05357.1
Hypothetical protein.
       0.572
EAQ06274.1
ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
     
 0.458
EAQ05246.1
Major capsid protein, HK97 family; COG4653 Predicted phage phi-C31 gp36 major capsid-like protein.
     
 0.454
EAQ06280.1
Hypothetical protein.
       0.435
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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