Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05354.1RecA-family ATPase; COG1066 Predicted ATP-dependent serine protease. (371 aa)    
Predicted Functional Partners:
EAQ05355.1
Hypothetical protein.
 
    0.927
EAQ05356.1
Hypothetical protein.
       0.773
EAQ07249.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
    
  0.655
EAQ05357.1
Hypothetical protein.
       0.572
EAQ07181.1
Hypothetical protein; COG3311 Predicted transcriptional regulator.
 
   
 0.560
EAQ07179.1
Symbiosis island integrase; COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.467
EAQ06284.1
Putative integrase/resolvase recombinase protein; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
     
 0.407
EAQ06274.1
ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
     
 0.406
EAQ05246.1
Major capsid protein, HK97 family; COG4653 Predicted phage phi-C31 gp36 major capsid-like protein.
     
 0.406
EAQ06216.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.403
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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