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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05358.1Transcriptional regulator, XRE family; COG2944 Predicted transcriptional regulator. (107 aa)    
Predicted Functional Partners:
EAQ05359.1
COG2929 Uncharacterized protein conserved in bacteria.
 
     0.916
EAQ05687.1
COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
   
    0.504
EAQ05360.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
       0.473
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.438
EAQ06280.1
Hypothetical protein.
    
  0.423
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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