Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05372.1S-layer protein RsaA; COG2931 RTX toxins and related Ca2+-binding proteins. (633 aa)    
Predicted Functional Partners:
EAQ07842.1
Lipolytic enzyme, G-D-S-L family; COG2755 Lysophospholipase L1 and related esterases.
   
 0.813
EAQ07669.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
  0.794
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
  0.739
EAQ06651.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 
   
 0.736
EAQ05347.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
 
   
 0.718
EAQ06652.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
 
   
 0.713
EAQ07506.1
Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains.
   
    0.582
EAQ05371.1
SAPC family protein.
 
     0.546
EAQ05373.1
Hypothetical protein.
       0.539
EAQ05346.1
ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
    0.518
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.