rpmH protein (Yoonia vestfoldensis SKA53) - STRING interaction network

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rpmH

COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)

Predicted Functional Partners:

rpoC

0.991

rplU

0.989

rpmB

0.989

EAQ05392.1

0.988

EAQ08159.1

0.988

rpsN

0.986

rpsU

0.985

rplM

0.982

rpmF

0.982

EAQ08129.1

0.982

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ05392.1	EAQ08129.1	SKA53_00410	SKA53_10404	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Hypothetical protein.	0.509
EAQ05392.1	EAQ08159.1	SKA53_00410	SKA53_10554	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0268 Ribosomal protein S20.	0.879
EAQ05392.1	rplM	SKA53_00410	SKA53_04443	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.847
EAQ05392.1	rplU	SKA53_00410	SKA53_04353	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.866
EAQ05392.1	rpmB	SKA53_00410	SKA53_09474	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.868
EAQ05392.1	rpmF	SKA53_00410	SKA53_05348	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.442
EAQ05392.1	rpmH	SKA53_00410	SKA53_00405	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.988
EAQ05392.1	rpoC	SKA53_00410	SKA53_13278	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.680
EAQ05392.1	rpsN	SKA53_00410	SKA53_13406	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.442
EAQ05392.1	rpsU	SKA53_00410	SKA53_13028	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.840
EAQ08129.1	EAQ05392.1	SKA53_10404	SKA53_00410	Hypothetical protein.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.509
EAQ08129.1	EAQ08159.1	SKA53_10404	SKA53_10554	Hypothetical protein.	COG0268 Ribosomal protein S20.	0.973
EAQ08129.1	rplM	SKA53_10404	SKA53_04443	Hypothetical protein.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.988
EAQ08129.1	rplU	SKA53_10404	SKA53_04353	Hypothetical protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.987
EAQ08129.1	rpmB	SKA53_10404	SKA53_09474	Hypothetical protein.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.982
EAQ08129.1	rpmF	SKA53_10404	SKA53_05348	Hypothetical protein.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.990
EAQ08129.1	rpmH	SKA53_10404	SKA53_00405	Hypothetical protein.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.982
EAQ08129.1	rpoC	SKA53_10404	SKA53_13278	Hypothetical protein.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
EAQ08129.1	rpsN	SKA53_10404	SKA53_13406	Hypothetical protein.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.992
EAQ08129.1	rpsU	SKA53_10404	SKA53_13028	Hypothetical protein.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.956