STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05397.1Hypothetical protein; COG1820 N-acetylglucosamine-6-phosphate deacetylase. (378 aa)    
Predicted Functional Partners:
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 0.984
EAQ05396.1
Hypothetical protein; COG1940 Transcriptional regulator/sugar kinase.
 
 
 0.964
glmS
D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.900
glmM
Phosphoglucomutase/phosphomannomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
     
 0.875
EAQ05825.1
Xylose operon repressor; COG1940 Transcriptional regulator/sugar kinase.
 
 
 0.817
EAQ07502.1
Competence protein F, putative; COG1040 Predicted amidophosphoribosyltransferases.
  
    0.801
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
  0.780
EAQ07699.1
Phosphoglucomutase/phosphomannomutase; COG1109 Phosphomannomutase.
     
 0.763
EAQ07788.1
PTS system IIA component, Man family; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.
    
 0.587
EAQ06249.1
Transcriptional regulator, GntR family; COG2188 Transcriptional regulators.
 
  
 0.571
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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