Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05396.1 | EAQ05398.1 | SKA53_00430 | SKA53_00440 | Hypothetical protein; COG1940 Transcriptional regulator/sugar kinase. | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.566 |
| EAQ05398.1 | EAQ05396.1 | SKA53_00440 | SKA53_00430 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; COG1940 Transcriptional regulator/sugar kinase. | 0.566 |
| EAQ05398.1 | EAQ05403.1 | SKA53_00440 | SKA53_00465 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. | 0.918 |
| EAQ05398.1 | EAQ05866.1 | SKA53_00440 | SKA53_07167 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DnaJ domain protein; COG2214 DnaJ-class molecular chaperone. | 0.577 |
| EAQ05398.1 | EAQ07075.1 | SKA53_00440 | SKA53_01726 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | COG4591 ABC-type transport system, involved in lipoprotein release, permease component. | 0.973 |
| EAQ05398.1 | EAQ07284.1 | SKA53_00440 | SKA53_02771 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.938 |
| EAQ05398.1 | EAQ07759.1 | SKA53_00440 | SKA53_13018 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.626 |
| EAQ05398.1 | EAQ07760.1 | SKA53_00440 | SKA53_13023 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins. | 0.673 |
| EAQ05398.1 | bamA | SKA53_00440 | SKA53_04063 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.637 |
| EAQ05398.1 | lolD | SKA53_00440 | SKA53_01731 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.918 |
| EAQ05398.1 | lptD | SKA53_00440 | SKA53_05253 | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.797 |
| EAQ05403.1 | EAQ05398.1 | SKA53_00465 | SKA53_00440 | ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.918 |
| EAQ05403.1 | EAQ07075.1 | SKA53_00465 | SKA53_01726 | ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. | COG4591 ABC-type transport system, involved in lipoprotein release, permease component. | 0.997 |
| EAQ05866.1 | EAQ05398.1 | SKA53_07167 | SKA53_00440 | DnaJ domain protein; COG2214 DnaJ-class molecular chaperone. | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.577 |
| EAQ05866.1 | lptD | SKA53_07167 | SKA53_05253 | DnaJ domain protein; COG2214 DnaJ-class molecular chaperone. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.474 |
| EAQ07075.1 | EAQ05398.1 | SKA53_01726 | SKA53_00440 | COG4591 ABC-type transport system, involved in lipoprotein release, permease component. | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.973 |
| EAQ07075.1 | EAQ05403.1 | SKA53_01726 | SKA53_00465 | COG4591 ABC-type transport system, involved in lipoprotein release, permease component. | ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. | 0.997 |
| EAQ07075.1 | bamA | SKA53_01726 | SKA53_04063 | COG4591 ABC-type transport system, involved in lipoprotein release, permease component. | Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.742 |
| EAQ07075.1 | lolD | SKA53_01726 | SKA53_01731 | COG4591 ABC-type transport system, involved in lipoprotein release, permease component. | ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.999 |
| EAQ07284.1 | EAQ05398.1 | SKA53_02771 | SKA53_00440 | N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase. | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.938 |
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