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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05400.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EAQ06693.1
Hypothetical protein.
 
     0.730
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.669
EAQ05399.1
COG4764 Uncharacterized protein conserved in bacteria.
       0.662
EAQ06330.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
   
 0.615
EAQ06690.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
     0.589
EAQ05401.1
COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.568
EAQ07951.1
Hypothetical protein.
  
     0.564
EAQ05964.1
Hypothetical protein; Belongs to the UPF0262 family.
  
     0.444
EAQ06680.1
S-formylglutathione hydrolase, putative; Serine hydrolase involved in the detoxification of formaldehyde.
      
 0.416
EAQ06434.1
Putative UTP--glucose-1-phosphate uridylyltransferase; COG1210 UDP-glucose pyrophosphorylase.
      
 0.414
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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