STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05407.1Selenide, water dikinase, putative; COG1252 NADH dehydrogenase, FAD-containing subunit. (698 aa)    
Predicted Functional Partners:
EAQ06175.1
COG0492 Thioredoxin reductase.
    
 0.882
EAQ05408.1
Hypothetical protein; COG2603 Predicted ATPase; Belongs to the SelU family.
 
   
 0.874
EAQ06745.1
Thiosulfate sulfurtransferase, Rhodanese-like; COG2897 Rhodanese-related sulfurtransferase.
    
 0.856
EAQ07140.1
Hypothetical protein; COG0457 FOG: TPR repeat.
   
 0.853
EAQ07548.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
   
 0.853
EAQ07753.1
COG3118 Thioredoxin domain-containing protein.
   
 0.853
EAQ07878.1
COG1145 Ferredoxin.
 
 
 0.850
EAQ07148.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
     
 0.847
EAQ05404.1
Permease, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
     0.824
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
     
 0.823
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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