STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05408.1Hypothetical protein; COG2603 Predicted ATPase; Belongs to the SelU family. (350 aa)    
Predicted Functional Partners:
EAQ05407.1
Selenide, water dikinase, putative; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
   
 0.840
EAQ05704.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
   
 0.722
EAQ05409.1
Putative aldose 1-epimerase protein; COG2017 Galactose mutarotase and related enzymes.
       0.603
EAQ05410.1
Putative beta-galactosidase protein; COG1874 Beta-galactosidase.
       0.603
EAQ05411.1
Smp-30/Cgr1 family protein; COG3386 Gluconolactonase.
       0.509
EAQ05412.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
       0.509
EAQ05413.1
Putative 2-dehydro-3-deoxygalactonokinase; COG3734 2-keto-3-deoxy-galactonokinase.
       0.509
EAQ05414.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.509
EAQ05415.1
COG3345 Alpha-galactosidase.
       0.509
EAQ05416.1
COG0395 ABC-type sugar transport system, permease component.
       0.509
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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