STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05531.1ABC transporter, substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component. (419 aa)    
Predicted Functional Partners:
EAQ05416.1
COG0395 ABC-type sugar transport system, permease component.
 
 0.999
EAQ05533.1
Hypothetical protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.995
EAQ05417.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.977
EAQ05206.1
ABC alpha-glucoside transporter, inner membrane subunit AglF; COG1175 ABC-type sugar transport systems, permease components.
 
 0.952
EAQ07377.1
COG1175 ABC-type sugar transport systems, permease components.
  
 0.908
EAQ05209.1
ABC alpha-glucoside transporter, ATPase subunit AglK; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.883
EAQ06067.1
COG3839 ABC-type sugar transport systems, ATPase components.
  
 0.883
EAQ07379.1
ABC sorbitol/mannitol transporter, ATPase subunit; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.883
EAQ05207.1
ABC alpha-glucoside transporter, inner membrane subunit AglG; COG0395 ABC-type sugar transport system, permease component.
 
 0.876
EAQ05532.1
Hypothetical protein; COG1414 Transcriptional regulator.
 
    0.841
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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