STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05538.1Oxidoreductase, molybdopterin-binding; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (941 aa)    
Predicted Functional Partners:
EAQ05536.1
Iron-sulfur cluster-binding protein; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
 0.999
EAQ07869.1
Formate dehydrogenase iron-sulfur subunit; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
 0.997
EAQ05535.1
Dimethyl sulfoxide reductase, C subunit, putative; COG3302 DMSO reductase anchor subunit.
 
 0.994
EAQ07078.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
  
 0.981
EAQ08077.1
COG1035 Coenzyme F420-reducing hydrogenase, beta subunit.
  
 0.978
EAQ06177.1
Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.968
EAQ07865.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
  
 0.964
EAQ07592.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.960
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
  
 0.956
EAQ06087.1
COG3474 Cytochrome c2.
   
 0.955
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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