Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05544.1 | EAQ05545.1 | SKA53_00619 | SKA53_00624 | Hypothetical protein; COG0748 putative heme iron utilization protein. | Excinuclease ABC subunit B; COG0326 Molecular chaperone, HSP90 family. | 0.787 |
| EAQ05544.1 | EAQ05547.1 | SKA53_00619 | SKA53_00634 | Hypothetical protein; COG0748 putative heme iron utilization protein. | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | 0.466 |
| EAQ05544.1 | uvrB | SKA53_00619 | SKA53_00629 | Hypothetical protein; COG0748 putative heme iron utilization protein. | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | 0.631 |
| EAQ05545.1 | EAQ05544.1 | SKA53_00624 | SKA53_00619 | Excinuclease ABC subunit B; COG0326 Molecular chaperone, HSP90 family. | Hypothetical protein; COG0748 putative heme iron utilization protein. | 0.787 |
| EAQ05545.1 | EAQ05547.1 | SKA53_00624 | SKA53_00634 | Excinuclease ABC subunit B; COG0326 Molecular chaperone, HSP90 family. | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | 0.466 |
| EAQ05545.1 | uvrB | SKA53_00624 | SKA53_00629 | Excinuclease ABC subunit B; COG0326 Molecular chaperone, HSP90 family. | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | 0.650 |
| EAQ05547.1 | EAQ05544.1 | SKA53_00634 | SKA53_00619 | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | Hypothetical protein; COG0748 putative heme iron utilization protein. | 0.466 |
| EAQ05547.1 | EAQ05545.1 | SKA53_00634 | SKA53_00624 | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | Excinuclease ABC subunit B; COG0326 Molecular chaperone, HSP90 family. | 0.466 |
| EAQ05547.1 | EAQ05548.1 | SKA53_00634 | SKA53_00639 | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | NADH-ubiquinone oxidoreductase family protein. | 0.657 |
| EAQ05547.1 | uvrB | SKA53_00634 | SKA53_00629 | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | 0.568 |
| EAQ05548.1 | EAQ05547.1 | SKA53_00639 | SKA53_00634 | NADH-ubiquinone oxidoreductase family protein. | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | 0.657 |
| EAQ05548.1 | uvrB | SKA53_00639 | SKA53_00629 | NADH-ubiquinone oxidoreductase family protein. | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | 0.647 |
| uvrB | EAQ05544.1 | SKA53_00629 | SKA53_00619 | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | Hypothetical protein; COG0748 putative heme iron utilization protein. | 0.631 |
| uvrB | EAQ05545.1 | SKA53_00629 | SKA53_00624 | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | Excinuclease ABC subunit B; COG0326 Molecular chaperone, HSP90 family. | 0.650 |
| uvrB | EAQ05547.1 | SKA53_00629 | SKA53_00634 | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | Hypothetical protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | 0.568 |
| uvrB | EAQ05548.1 | SKA53_00629 | SKA53_00639 | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] | NADH-ubiquinone oxidoreductase family protein. | 0.647 |