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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05564.1Hypothetical protein; COG2186 Transcriptional regulators. (230 aa)    
Predicted Functional Partners:
EAQ05467.1
COG2124 Cytochrome P450.
    
  0.744
EAQ06947.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
  0.738
EAQ06052.1
Regulatory protein GntR, HTH:GntR, C-terminal; COG1802 Transcriptional regulators.
  
  
 0.617
EAQ05338.1
Putative transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
  
 0.611
EAQ05562.1
ABC transporter, periplasmic binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
     0.572
EAQ05563.1
Putative enzyme; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
       0.519
EAQ05560.1
ABC transporter, inner membrane subunit; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
     0.484
EAQ06249.1
Transcriptional regulator, GntR family; COG2188 Transcriptional regulators.
  
    0.481
EAQ08245.1
Transcriptional regulatory protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.426
EAQ05781.1
Transcriptional regulator, GntR family; COG2188 Transcriptional regulators.
  
    0.421
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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