Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05567.1Sulfate/tungstate uptake family ABC transporter, permease protein; COG4662 ABC-type tungstate transport system, periplasmic component. (231 aa)    
Predicted Functional Partners:
EAQ05569.1
COG2998 ABC-type tungstate transport system, permease component.
 
  
 0.989
EAQ05568.1
Sulfate/tungstate uptake family ABC transporter, ATP-binding protein; COG1135 ABC-type metal ion transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
  0.981
EAQ05566.1
DNA-binding protein, excisionase family; COG1910 Periplasmic molybdate-binding protein/domain.
 
    0.900
EAQ07879.1
Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
  
 0.886
fdhD
Formate dehydrogenase accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.711
EAQ07870.1
Formate dehydrogenase, alpha subunit, putative; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.597
EAQ07872.1
Putative chaperone; COG3381 Uncharacterized component of anaerobic dehydrogenases.
 
    0.528
EAQ07878.1
COG1145 Ferredoxin.
 
     0.506
EAQ08138.1
Formate dehydrogenase, alpha subunit; COG3383 Uncharacterized anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.503
EAQ07868.1
COG2864 Cytochrome b subunit of formate dehydrogenase.
 
     0.457
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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