STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05571.1COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (268 aa)    
Predicted Functional Partners:
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
     
 0.869
EAQ05570.1
COG2268 Uncharacterized protein conserved in bacteria.
 
     0.866
EAQ05572.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
  0.858
EAQ05467.1
COG2124 Cytochrome P450.
   
 0.851
EAQ05577.1
Putative branched-chain amino acid transporter substrate-binding protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
   0.758
EAQ05579.1
Transcriptional regulator, AraC family; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.751
EAQ05575.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.740
EAQ05574.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
     0.736
EAQ06632.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.723
EAQ05573.1
Putative branched-chain amino acid transporter ATP-binding protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
     0.715
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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