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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05587.1Pca operon transcriptional activator PcaQ; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
EAQ05583.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.738
EAQ05584.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.664
EAQ05586.1
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
     0.639
EAQ05585.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
     0.614
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
     
 0.602
EAQ05580.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
 
     0.577
EAQ05582.1
Hypothetical protein.
 
     0.524
EAQ05581.1
Beta-ketoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.512
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.448
EAQ05479.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
  
     0.404
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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