STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05621.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
EAQ07210.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.891
EAQ07209.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.890
EAQ07207.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.887
EAQ05620.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.820
EAQ05623.1
Acetyltransferase, putative; COG0110 Acetyltransferase (isoleucine patch superfamily).
  
  
 0.797
EAQ05622.1
Hypothetical protein.
       0.782
EAQ06431.1
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.769
EAQ07388.1
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.769
EAQ05625.1
Glycosyltransferase, group 1; COG0438 Glycosyltransferase.
  
 
 0.682
EAQ06785.1
Zinc carboxypeptidase A metalloprotease (M14); COG0438 Glycosyltransferase.
  
 
 0.664
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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