STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05628.1Glycosyltransferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis. (249 aa)    
Predicted Functional Partners:
EAQ05625.1
Glycosyltransferase, group 1; COG0438 Glycosyltransferase.
 
 
  0.904
EAQ05627.1
spsA-like protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.899
EAQ05626.1
COG0110 Acetyltransferase (isoleucine patch superfamily).
 
    0.874
fcl
Putative nucleotide di-P-sugar epimerase or dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
 0.712
EAQ05620.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.703
EAQ08148.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.641
gmd
NAD-dependent epimerase/dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
  0.622
EAQ05467.1
COG2124 Cytochrome P450.
    
  0.529
EAQ05621.1
Hypothetical protein.
  
    0.526
EAQ05622.1
Hypothetical protein.
       0.507
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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