STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05631.1Oxidoreductase, zinc-binding dehydrogenase family; COG1062 Zn-dependent alcohol dehydrogenases, class III. (367 aa)    
Predicted Functional Partners:
EAQ06680.1
S-formylglutathione hydrolase, putative; Serine hydrolase involved in the detoxification of formaldehyde.
 0.993
EAQ06069.1
COG1454 Alcohol dehydrogenase, class IV.
    
 0.797
EAQ08108.1
COG1454 Alcohol dehydrogenase, class IV.
    
 0.797
EAQ05630.1
Mandelate racemase/muconate lactonizing enzyme family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.792
EAQ05467.1
COG2124 Cytochrome P450.
    
 0.747
EAQ07670.1
Possible epoxide hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
    
  0.747
EAQ07639.1
Fatty acid desaturase family protein.
     
  0.727
EAQ07198.1
Putative Rieske-like ferredoxin MocE; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
     
  0.709
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.697
EAQ05633.1
Esterase EstC, putative; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
   
  0.674
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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