STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05634.13-oxoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (261 aa)    
Predicted Functional Partners:
EAQ05481.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 0.985
EAQ05585.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 0.984
EAQ05637.1
Haloacid dehalogenase, type II; COG1011 Predicted hydrolase (HAD superfamily).
 
 
  0.855
EAQ05633.1
Esterase EstC, putative; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.836
EAQ05636.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
      
0.810
EAQ05632.1
Tetracycline resistance protein; COG0477 Permeases of the major facilitator superfamily.
       0.807
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.799
EAQ05635.1
COG1171 Threonine dehydratase.
    
  0.788
EAQ05584.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.702
EAQ05480.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.702
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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