Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05271.1 | EAQ06002.1 | SKA53_05830 | SKA53_07851 | Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase. | COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.474 |
| EAQ05271.1 | EAQ06061.1 | SKA53_05830 | SKA53_08146 | Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase. | Hypothetical protein; COG0642 Signal transduction histidine kinase. | 0.560 |
| EAQ05271.1 | EAQ06975.1 | SKA53_05830 | SKA53_01226 | Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.681 |
| EAQ05271.1 | EAQ08011.1 | SKA53_05830 | SKA53_09814 | Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase. | Two component transcriptional regulator, LuxR family; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.474 |
| EAQ06001.1 | EAQ06002.1 | SKA53_07846 | SKA53_07851 | Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain. | COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.980 |
| EAQ06001.1 | EAQ06037.1 | SKA53_07846 | SKA53_08026 | Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.953 |
| EAQ06001.1 | EAQ06061.1 | SKA53_07846 | SKA53_08146 | Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain. | Hypothetical protein; COG0642 Signal transduction histidine kinase. | 0.998 |
| EAQ06001.1 | EAQ06975.1 | SKA53_07846 | SKA53_01226 | Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.412 |
| EAQ06001.1 | EAQ08011.1 | SKA53_07846 | SKA53_09814 | Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain. | Two component transcriptional regulator, LuxR family; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.963 |
| EAQ06002.1 | EAQ05271.1 | SKA53_07851 | SKA53_05830 | COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase. | 0.474 |
| EAQ06002.1 | EAQ06001.1 | SKA53_07851 | SKA53_07846 | COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain. | 0.980 |
| EAQ06002.1 | EAQ06061.1 | SKA53_07851 | SKA53_08146 | COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein; COG0642 Signal transduction histidine kinase. | 0.997 |
| EAQ06002.1 | EAQ06975.1 | SKA53_07851 | SKA53_01226 | COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.432 |
| EAQ06002.1 | EAQ08011.1 | SKA53_07851 | SKA53_09814 | COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Two component transcriptional regulator, LuxR family; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.752 |
| EAQ06037.1 | EAQ06001.1 | SKA53_08026 | SKA53_07846 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain. | 0.953 |
| EAQ06037.1 | EAQ06061.1 | SKA53_08026 | SKA53_08146 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Hypothetical protein; COG0642 Signal transduction histidine kinase. | 0.997 |
| EAQ06037.1 | EAQ06973.1 | SKA53_08026 | SKA53_01216 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | COG3212 Predicted membrane protein. | 0.620 |
| EAQ06037.1 | EAQ06974.1 | SKA53_08026 | SKA53_01221 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Hypothetical protein. | 0.675 |
| EAQ06037.1 | EAQ06975.1 | SKA53_08026 | SKA53_01226 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.528 |
| EAQ06037.1 | EAQ07128.1 | SKA53_08026 | SKA53_01991 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Hypothetical protein. | 0.494 |
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