Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06975.1Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. (138 aa)    
Predicted Functional Partners:
EAQ06974.1
Hypothetical protein.
 
     0.883
EAQ06973.1
COG3212 Predicted membrane protein.
 
     0.826
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
     
 0.822
EAQ07128.1
Hypothetical protein.
  
     0.580
EAQ07846.1
Metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
 
   0.511
EAQ06037.1
Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins.
 
 
0.456
EAQ06001.1
Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
  
  
 0.440
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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