STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07007.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
EAQ07006.1
Hypothetical protein.
 
     0.954
EAQ07005.1
Sigma-24; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.904
EAQ05458.1
Tellurite resistance protein.
  
     0.660
EAQ06285.1
Hypothetical protein.
  
     0.639
EAQ06919.1
Hypothetical protein.
  
     0.639
EAQ07164.1
Hypothetical protein.
  
     0.581
EAQ07919.1
Hypothetical protein.
  
     0.567
EAQ08037.1
Hypothetical protein.
  
     0.565
EAQ07004.1
RNA polymerase sigma-70 factor.
       0.563
EAQ07291.1
Hypothetical protein.
  
     0.555
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.