STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07009.1Hypothetical protein. (92 aa)    
Predicted Functional Partners:
EAQ07010.1
COG0546 Predicted phosphatases.
 
     0.873
EAQ07008.1
Two component diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.692
EAQ07011.1
COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family.
       0.551
EAQ06970.1
Hypothetical protein; COG1455 Phosphotransferase system cellobiose-specific component IIC.
  
     0.495
EAQ07021.1
Hypothetical protein.
  
     0.474
EAQ06810.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
     0.439
EAQ07291.1
Hypothetical protein.
  
     0.434
EAQ06486.1
Hypothetical protein; COG1279 Lysine efflux permease.
  
     0.412
EAQ06660.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
     0.404
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.