STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07054.1COG3119 Arylsulfatase A and related enzymes. (502 aa)    
Predicted Functional Partners:
betI
Transcriptional regulator, BetI; Repressor involved in choline regulation of the bet genes.
 
   
 0.888
EAQ07056.1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
   
 0.735
EAQ07052.1
Putative glycine betaine-binding ABC transporter protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
     0.689
EAQ07055.1
Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
 
    0.686
EAQ05415.1
COG3345 Alpha-galactosidase.
  
  
  0.607
EAQ05414.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
   0.531
EAQ05571.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
   0.531
EAQ05597.1
Possible 3-hydroxyacyl-CoA dehydrogenase type II; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
   0.531
EAQ07189.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
   0.531
EAQ05468.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
   0.531
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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