STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07077.1COG3238 Uncharacterized protein conserved in bacteria. (144 aa)    
Predicted Functional Partners:
EAQ07981.1
COG3238 Uncharacterized protein conserved in bacteria.
  
  
  0.834
EAQ07980.1
COG3238 Uncharacterized protein conserved in bacteria.
    
  0.828
EAQ07078.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
 
     0.618
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
    0.504
EAQ08123.1
COG0284 Orotidine-5'-phosphate decarboxylase.
  
    0.503
EAQ08185.1
COG0167 Dihydroorotate dehydrogenase.
  
    0.437
EAQ06458.1
TfoX domain protein; COG3070 Regulator of competence-specific genes.
  
     0.436
EAQ07907.1
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
    0.431
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.