Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07081.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
EAQ06589.1
COG2020 putative protein-S-isoprenylcysteine methyltransferase.
  
  
  0.861
EAQ06035.1
COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
  
 0.860
EAQ07082.1
Probable UDP-glucose 4-epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
    
  0.694
EAQ06624.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
  
     0.587
parE
DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
       0.560
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 0.557
EAQ05781.1
Transcriptional regulator, GntR family; COG2188 Transcriptional regulators.
 
    0.530
EAQ05454.1
Oxidoreductase, zinc-binding dehydrogenase family; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
  
  
 0.528
EAQ07084.1
Membrane protein, putative; COG2215 ABC-type uncharacterized transport system, permease component; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.495
EAQ06249.1
Transcriptional regulator, GntR family; COG2188 Transcriptional regulators.
  
    0.468
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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