STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07087.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
EAQ05309.1
Hypothetical protein; COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
  
  0.764
EAQ05929.1
Lipoprotein, putative; COG0419 ATPase involved in DNA repair.
  
    0.675
EAQ06634.1
Hypothetical protein.
  
     0.669
EAQ06838.1
Hypothetical protein.
 
 
   0.668
EAQ07471.1
core-2/I-branching enzyme family protein.
  
     0.659
EAQ05216.1
Hypothetical protein.
  
     0.656
EAQ06166.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
  0.639
EAQ07658.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.578
EAQ06156.1
Hypothetical protein.
  
     0.571
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.566
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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