Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EAQ07092.1Endoglucanase; COG1363 Cellulase M and related proteins. (386 aa)    
Predicted Functional Partners:
EAQ06498.1
Putative Glycoside hydrolase; COG1472 Beta-glucosidase-related glycosidases.
     
 0.553
EAQ07093.1
Hypothetical protein.
       0.544
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
    0.519
EAQ07095.1
Chaperonin csaA; COG0073 EMAP domain.
     
 0.454
EAQ05618.1
Hypothetical protein.
     
 0.408
EAQ07096.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.408
EAQ05203.1
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
     
 0.408
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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