Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ07098.1Transcriptional regulator, XRE family; COG1396 Predicted transcriptional regulators. (130 aa)    
Predicted Functional Partners:
EAQ07099.1
TPR repeat family protein.
       0.853
EAQ07100.1
Transcriptional regulator, MarR family; COG1846 Transcriptional regulators.
   
   0.725
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
  0.695
EAQ06518.1
Hypothetical protein.
  
     0.679
EAQ05424.1
Hypothetical protein.
  
     0.673
EAQ05212.1
MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase.
  
     0.621
EAQ06403.1
COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family.
  
     0.617
EAQ05213.1
Hypothetical protein.
  
     0.586
EAQ07097.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
    
  0.579
EAQ07963.1
Hypothetical protein; COG1335 Amidases related to nicotinamidase.
  
     0.560
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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