Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ05761.1 | EAQ06037.1 | SKA53_06642 | SKA53_08026 | Hypothetical protein; COG2771 DNA-binding HTH domain-containing proteins. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.518 |
EAQ05761.1 | EAQ07128.1 | SKA53_06642 | SKA53_01991 | Hypothetical protein; COG2771 DNA-binding HTH domain-containing proteins. | Hypothetical protein. | 0.546 |
EAQ06037.1 | EAQ05761.1 | SKA53_08026 | SKA53_06642 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Hypothetical protein; COG2771 DNA-binding HTH domain-containing proteins. | 0.518 |
EAQ06037.1 | EAQ06975.1 | SKA53_08026 | SKA53_01226 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.528 |
EAQ06037.1 | EAQ07128.1 | SKA53_08026 | SKA53_01991 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Hypothetical protein. | 0.494 |
EAQ06135.1 | EAQ07128.1 | SKA53_08516 | SKA53_01991 | Hypothetical protein. | Hypothetical protein. | 0.547 |
EAQ06161.1 | EAQ06178.1 | SKA53_08646 | SKA53_08731 | fixH protein, putative. | Cytochrome c oxidase, cbb3-type, subunit IV. | 0.945 |
EAQ06161.1 | EAQ07128.1 | SKA53_08646 | SKA53_01991 | fixH protein, putative. | Hypothetical protein. | 0.473 |
EAQ06178.1 | EAQ06161.1 | SKA53_08731 | SKA53_08646 | Cytochrome c oxidase, cbb3-type, subunit IV. | fixH protein, putative. | 0.945 |
EAQ06178.1 | EAQ06182.1 | SKA53_08731 | SKA53_08751 | Cytochrome c oxidase, cbb3-type, subunit IV. | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | 0.831 |
EAQ06178.1 | EAQ07128.1 | SKA53_08731 | SKA53_01991 | Cytochrome c oxidase, cbb3-type, subunit IV. | Hypothetical protein. | 0.688 |
EAQ06178.1 | EAQ07679.1 | SKA53_08731 | SKA53_12618 | Cytochrome c oxidase, cbb3-type, subunit IV. | Hypothetical protein. | 0.461 |
EAQ06182.1 | EAQ06178.1 | SKA53_08751 | SKA53_08731 | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | Cytochrome c oxidase, cbb3-type, subunit IV. | 0.831 |
EAQ06182.1 | EAQ07128.1 | SKA53_08751 | SKA53_01991 | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | Hypothetical protein. | 0.692 |
EAQ06182.1 | EAQ07679.1 | SKA53_08751 | SKA53_12618 | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | Hypothetical protein. | 0.540 |
EAQ06975.1 | EAQ06037.1 | SKA53_01226 | SKA53_08026 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.528 |
EAQ06975.1 | EAQ07128.1 | SKA53_01226 | SKA53_01991 | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | Hypothetical protein. | 0.580 |
EAQ07101.1 | EAQ07128.1 | SKA53_01856 | SKA53_01991 | COG0346 Lactoylglutathione lyase and related lyases. | Hypothetical protein. | 0.760 |
EAQ07128.1 | EAQ05761.1 | SKA53_01991 | SKA53_06642 | Hypothetical protein. | Hypothetical protein; COG2771 DNA-binding HTH domain-containing proteins. | 0.546 |
EAQ07128.1 | EAQ06037.1 | SKA53_01991 | SKA53_08026 | Hypothetical protein. | Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins. | 0.494 |
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