Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ07134.1Oxidoreductase, Gfo/Idh/MocA family; COG0673 Predicted dehydrogenases and related proteins. (326 aa)    
Predicted Functional Partners:
EAQ05808.1
Putative oxidoreductase protein; COG0673 Predicted dehydrogenases and related proteins.
  
  
  0.632
EAQ05467.1
COG2124 Cytochrome P450.
     
  0.502
EAQ06947.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
  0.502
rpoH
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
       0.497
EAQ07185.1
Hypothetical protein; COG4130 Predicted sugar epimerase.
  
 
  0.488
EAQ07646.1
Inositol monophosphatase family protein; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.
     
  0.458
EAQ06933.1
Inositol-1-monophosphatase, putative; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.
     
  0.458
EAQ07194.1
MocC-like protein; COG1082 Sugar phosphate isomerases/epimerases; similar to tomyo-inositol catabolism iolE.
  
 
  0.435
EAQ06194.1
Putative myo-inositol catabolism protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.435
EAQ05409.1
Putative aldose 1-epimerase protein; COG2017 Galactose mutarotase and related enzymes.
 
 
  0.412
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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