STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
folE2Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate. (414 aa)    
Predicted Functional Partners:
EAQ08094.1
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.864
ribB
Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.860
EAQ05846.1
Dihydroneopterin aldolase, putative; COG1539 Dihydroneopterin aldolase.
 
  
 0.823
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
    
  0.776
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
       0.659
EAQ08063.1
cobW protein, putative; COG0523 putative GTPases (G3E family).
  
  
 0.624
EAQ07572.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
  
 0.624
EAQ06715.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.607
EAQ07919.1
Hypothetical protein.
  
     0.594
EAQ07284.1
N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.588
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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