STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07156.1COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit. (127 aa)    
Predicted Functional Partners:
EAQ07157.1
COG4765 Uncharacterized protein conserved in bacteria.
 
     0.910
EAQ05548.1
NADH-ubiquinone oxidoreductase family protein.
  
    0.793
clpX
ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
    0.674
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.633
EAQ07540.1
COG4395 Uncharacterized protein conserved in bacteria.
  
     0.626
EAQ07951.1
Hypothetical protein.
  
     0.623
EAQ05869.1
Cobalt chelatase, pCobT subunit; COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase).
  
     0.539
EAQ06693.1
Hypothetical protein.
  
     0.526
EAQ06564.1
Hypothetical protein; COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase.
  
     0.521
EAQ07503.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.520
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.