STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07163.1COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (122 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
0.986
EAQ06370.1
Probable two-component sensor histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.981
EAQ07165.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
 
 0.956
EAQ08009.1
COG0642 Signal transduction histidine kinase.
 
 0.940
EAQ07164.1
Hypothetical protein.
       0.853
EAQ07785.1
COG0642 Signal transduction histidine kinase.
 
 0.830
EAQ05201.1
Sensory box sensor histidine kianse/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.776
EAQ06006.1
DNA-binding response regulator QseB, putative; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.771
EAQ07992.1
Phosphate regulon transcriptional regulatory protein PhoB; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  
 
0.760
EAQ07709.1
Putative periplasmic iron-binding protein; COG0642 Signal transduction histidine kinase.
 
 0.758
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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